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C A L L F O R P A P E R S
The 11th International Workshop on Biological Knowledge Discovery
from
Big Data (BIOKDD2020)
September 14 - 17, 2020
Bratislava, Slovakia
http://www.dexa.org/biokdd2020
email:
biokdd2020@easychair.org
Papers submission:
https://easychair.org/conferences/?conf=biokdd2020
*** IMPORTANT DATES ***
Paper submission: March 16, 2020
Notification of acceptance: May 20, 2020
Camera-ready copies due: June 19, 2020
*** PUBLICATION ***
All accepted Workshops papers will be published in a volume of
"Communications in Computer and Information Science" (CCIS) by
Springer.
All published papers will be indexed appropriately in all major
indexes.
Selected high-quality papers will be invited to be published,
after
revision and extension, in special issues of international
journals.
*** SCOPE ***
In the recent years, there has been a rapid development of
biological
technologies producing more and more biological data, i.e., data
related
to biological macromolecules (DNA, RNA and proteins). The rise of
Next
Generation Sequencing (NGS) technologies, also known as
high-throughput
sequencing technologies, has contributed actively to the deluge of
these
data. In general, these data are big, heterogeneous, complex, and
distributed in all over the world in databases. Analyzing
biological big
data is a challenging task, not only, because of its complexity
and its
multiple and numerous correlated factors, but also, because of the
continuous evolution of our understanding of the biological
mechanisms.
Classical approaches of biological data analysis are no longer
efficient
and produce only a very limited amount of information, compared to
the
numerous and complex biological mechanisms under study. From here
comes
the necessity to adopt new computer tools and develop new in
silico high
performance approaches to support us in the analysis of biological
big
data and, hence, to help us in our understanding of the
correlations
that exist between, on one hand, structures and functional
patterns in
biological macromolecules and, on the other hand, genetic and
biochemical mechanisms. Biological Knowledge Discovery from Big
Data
(BIOKDD) is a response to these new trends.
*** TOPICS ***
Topics of BIOKDD’20 workshop includes, but not limited to:
Data Preprocessing: - Biological Big Data Storage, Representation
and Management (data
warehouses, databases, sequences, trees, graphs, biological
networks and
pathways, …)
- Biological Big Data Cleaning (errors removal, redundant data
removal,
completion of missing data, …)
- Feature Extraction (motifs, subgraphs, …)
- Feature Selection (filter approaches, wrapper approaches, hybrid
approaches, embedded approaches, …)
Data Mining: - Biological Big Data Regression (regression of
biological sequences…)
- Biological Big Data Clustering/Biclustering (microarray data
biclustering, clustering/biclustering of biological sequences, …)
- Biological Big Data Classification (classification of biological
sequences…)
- Association Rules Learning from Biological Big Data
- Text mining and Application to Biological Sequences
- Web mining and Application to Biological Big Data, Parallel
- Cloud and Grid Computing for Biological Big Data Mining
Data Postprocessing:
- Biological Nuggets of Knowledge Filtering
- Biological Nuggets of Knowledge Representation and Visualization
- Biological Nuggets of Knowledge Evaluation (calculation of the
classification error rate, evaluation of the association rules via
numerical indicators, e.g. measurements of interest, … )
- Biological Nuggets of Knowledge Integration
**Authors are invited to electronically submit original research
contributions or experience reports in English. Submitted papers
should
not exceed 5 pages in Springer CCIS format. Formatting guidelines:
http://www.dexa.org/formatting_guidelines
Online Papers
https://easychair.org/conferences/?conf=biokdd2020
*** ACCEPTED PAPERS ***
All accepted papers will be published by Springer in
"Communications in
Computer and Information Science (CCIS). Authors of all accepted
papers
must sign a Springer copyright release form. At least one of the
authors
of an accepted paper must register to DEXA’20 conference and
present the
paper at BIOKDD’20 workshop.
*** PC Chair ***
Mourad Elloumi, LaTICE - Tunisia (
mourad.elloumi@gmail.com)
Program committee:
http://www.dexa.org/biokdd2020
For further enquiries please contact PC Chairs
(
biokdd2020@easychair.org)
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Hesti Sudjana Departement of Telecooperation Johannes Kepler
University Linz
Science Park 3, Altenberger Straße 69, 4040 Linz, Austria
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